Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.46■□□□□ 0.22
LMO3Q8TAP4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LMO3Q8TAP4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 LINC00552-201ENST00000625151 2579 ntBASIC16.45■□□□□ 0.22
LMO3Q8TAP4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.45■□□□□ 0.22
LMO3Q8TAP4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC104596.2-201ENST00000512793 793 ntBASIC16.45■□□□□ 0.22
LMO3Q8TAP4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC004233.3-201ENST00000607794 1269 ntBASIC16.45■□□□□ 0.22
LMO3Q8TAP4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 TSPY26P-202ENST00000565928 3884 ntBASIC16.45■□□□□ 0.22
LMO3Q8TAP4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LMO3Q8TAP4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 AL137783.1-201ENST00000623494 1896 ntBASIC16.44■□□□□ 0.22
LMO3Q8TAP4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 AC018529.2-202ENST00000611482 3087 ntBASIC16.44■□□□□ 0.22
LMO3Q8TAP4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 C1QBPP1-201ENST00000400117 770 ntBASIC16.44■□□□□ 0.22
LMO3Q8TAP4 MYCLP2-201ENST00000449268 967 ntBASIC16.44■□□□□ 0.22
LMO3Q8TAP4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 MIR4745-201ENST00000577608 62 ntBASIC16.44■□□□□ 0.22
LMO3Q8TAP4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 AC007431.3-201ENST00000623221 587 ntBASIC16.44■□□□□ 0.22
LMO3Q8TAP4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 AC018442.1-201ENST00000421439 2061 ntBASIC16.44■□□□□ 0.22
LMO3Q8TAP4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LMO3Q8TAP4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms