Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 LINC00528-201ENST00000600723 2160 ntBASIC14.47□□□□□ -0.09
NUP43Q8NFH3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 LINC02228-204ENST00000642115 2962 ntBASIC14.47□□□□□ -0.09
NUP43Q8NFH3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 PMS2P2-201ENST00000425039 1128 ntBASIC14.47□□□□□ -0.09
NUP43Q8NFH3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 SPDYE18-201ENST00000510091 1050 ntBASIC14.47□□□□□ -0.09
NUP43Q8NFH3 AC093214.1-201ENST00000511688 1107 ntBASIC14.47□□□□□ -0.09
NUP43Q8NFH3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 SRD5A3P1-201ENST00000603021 949 ntBASIC14.47□□□□□ -0.09
NUP43Q8NFH3 AL158212.4-201ENST00000624062 1286 ntBASIC14.47□□□□□ -0.09
NUP43Q8NFH3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 AL645728.2-202ENST00000641679 227 ntBASIC14.47□□□□□ -0.09
NUP43Q8NFH3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.47□□□□□ -0.09
NUP43Q8NFH3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 AL589987.1-201ENST00000453380 819 ntBASIC14.46□□□□□ -0.09
NUP43Q8NFH3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 RFPL4AP1-201ENST00000530883 850 ntBASIC14.46□□□□□ -0.09
NUP43Q8NFH3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
NUP43Q8NFH3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NUP43Q8NFH3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms