Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEFF1Q8IYR6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEFF1Q8IYR6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 CYP46A4P-201ENST00000414953 267 ntBASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AC079178.1-201ENST00000420915 656 ntBASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AC244157.2-201ENST00000616239 1006 ntBASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AC138627.1-207ENST00000641560 1006 ntBASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AL391005.1-201ENST00000623953 2435 ntBASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 AC024909.3-201ENST00000611513 2257 ntBASIC15.26■□□□□ 0.03
TMEFF1Q8IYR6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 HINT2P1-201ENST00000419438 481 ntBASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 NKAIN1P1-201ENST00000435754 582 ntBASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 RN7SL769P-201ENST00000469386 295 ntBASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 AC044849.1-201ENST00000519737 1188 ntBASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 CHMP4BP1-201ENST00000556017 588 ntBASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 PPY2P-201ENST00000582808 702 ntBASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 PRSS30P-206ENST00000641773 873 ntBASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TMEFF1Q8IYR6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms