Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
UBR1Q8IWV7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 CR383656.3-201ENST00000551315 183 ntBASIC21.24■□□□□ 0.99
UBR1Q8IWV7 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 RN7SL396P-201ENST00000471086 295 ntBASIC21.24■□□□□ 0.99
UBR1Q8IWV7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
UBR1Q8IWV7 AC007326.1-201ENST00000604539 458 ntBASIC21.24■□□□□ 0.99
UBR1Q8IWV7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC21.24■□□□□ 0.99
UBR1Q8IWV7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 TMBIM7P-202ENST00000641474 1516 ntBASIC21.23■□□□□ 0.99
UBR1Q8IWV7 CICP11-201ENST00000434745 2827 ntBASIC21.23■□□□□ 0.99
UBR1Q8IWV7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 AC023090.2-201ENST00000625182 2110 ntBASIC21.23■□□□□ 0.99
UBR1Q8IWV7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 MIR3180-2-201ENST00000581748 88 ntBASIC21.23■□□□□ 0.99
UBR1Q8IWV7 RN7SL596P-201ENST00000582123 288 ntBASIC21.23■□□□□ 0.99
UBR1Q8IWV7 AC009560.1-201ENST00000620208 434 ntBASIC21.23■□□□□ 0.99
UBR1Q8IWV7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 AC027601.3-201ENST00000622907 509 ntBASIC21.23■□□□□ 0.99
UBR1Q8IWV7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBR1Q8IWV7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 STK16-203ENST00000409516 895 ntTSL 2 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 AC012508.2-201ENST00000567613 1472 ntBASIC21.22■□□□□ 0.99
UBR1Q8IWV7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
UBR1Q8IWV7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 MARK2P16-201ENST00000605714 1723 ntBASIC21.21■□□□□ 0.99
UBR1Q8IWV7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 AL592076.1-201ENST00000424448 303 ntBASIC21.21■□□□□ 0.99
UBR1Q8IWV7 AC092638.2-201ENST00000441105 947 ntBASIC21.21■□□□□ 0.99
UBR1Q8IWV7 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 AP000911.2-201ENST00000534330 502 ntBASIC21.21■□□□□ 0.99
UBR1Q8IWV7 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
UBR1Q8IWV7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms