Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 REXO1L5P-201ENST00000622260 2098 ntBASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPAS4Q8IUM7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 KC6-207ENST00000600644 2311 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 TUBB8P8-201ENST00000458717 1058 ntBASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 AC026434.2-201ENST00000506094 1078 ntBASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 AC013355.1-201ENST00000562625 723 ntBASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 RN7SL774P-201ENST00000577467 290 ntBASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 BNIP3P13-201ENST00000599968 566 ntBASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPAS4Q8IUM7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 GHSR-202ENST00000427970 912 ntBASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 Z97180.1-201ENST00000445173 988 ntBASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 AL360270.3-201ENST00000609118 1348 ntBASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.34■□□□□ 0.21
NPAS4Q8IUM7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS4Q8IUM7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NPAS4Q8IUM7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS4Q8IUM7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS4Q8IUM7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS4Q8IUM7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS4Q8IUM7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS4Q8IUM7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NPAS4Q8IUM7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPAS4Q8IUM7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms