Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 GHSR-202ENST00000427970 912 ntBASIC19.26■□□□□ 0.67
SKAP1Q86WV1 AL353705.2-201ENST00000428243 662 ntBASIC19.26■□□□□ 0.67
SKAP1Q86WV1 MKNK2P1-201ENST00000437526 628 ntBASIC19.26■□□□□ 0.67
SKAP1Q86WV1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 KRT18P58-201ENST00000527480 1120 ntBASIC19.26■□□□□ 0.67
SKAP1Q86WV1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 KRT8P12-202ENST00000472924 1397 ntBASIC19.26■□□□□ 0.67
SKAP1Q86WV1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SKAP1Q86WV1 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AL080243.2-201ENST00000418783 582 ntBASIC19.25■□□□□ 0.67
SKAP1Q86WV1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AL079307.3-201ENST00000556114 283 ntBASIC19.25■□□□□ 0.67
SKAP1Q86WV1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SKAP1Q86WV1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SKAP1Q86WV1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms