Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 AP000845.1-201ENST00000581677 2131 ntBASIC13.91□□□□□ -0.18
VBP1P61758 AC023090.2-201ENST00000625182 2110 ntBASIC13.91□□□□□ -0.18
VBP1P61758 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.91□□□□□ -0.18
VBP1P61758 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
VBP1P61758 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VBP1P61758 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.9□□□□□ -0.18
VBP1P61758 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VBP1P61758 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VBP1P61758 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.9□□□□□ -0.18
VBP1P61758 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
VBP1P61758 LINC00265-3P-201ENST00000447588 903 ntBASIC13.9□□□□□ -0.18
VBP1P61758 AL136038.3-201ENST00000561909 1096 ntBASIC13.9□□□□□ -0.18
VBP1P61758 MIR4515-201ENST00000584082 81 ntBASIC13.9□□□□□ -0.18
VBP1P61758 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.9□□□□□ -0.18
VBP1P61758 AP006294.2-201ENST00000641667 209 ntBASIC13.9□□□□□ -0.18
VBP1P61758 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.9□□□□□ -0.18
VBP1P61758 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VBP1P61758 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.9□□□□□ -0.18
VBP1P61758 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VBP1P61758 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
VBP1P61758 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
VBP1P61758 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.89□□□□□ -0.19
VBP1P61758 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.89□□□□□ -0.19
VBP1P61758 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 NUS1P2-201ENST00000417358 873 ntBASIC13.89□□□□□ -0.19
VBP1P61758 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.89□□□□□ -0.19
VBP1P61758 AC002347.1-201ENST00000569543 541 ntBASIC13.89□□□□□ -0.19
VBP1P61758 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.89□□□□□ -0.19
VBP1P61758 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 AL591684.3-201ENST00000605187 298 ntBASIC13.89□□□□□ -0.19
VBP1P61758 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.89□□□□□ -0.19
VBP1P61758 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.89□□□□□ -0.19
VBP1P61758 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VBP1P61758 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms