Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.63□□□□□ -0.23
SEC61A1P61619 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.63□□□□□ -0.23
SEC61A1P61619 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SEC61A1P61619 AC003101.2-201ENST00000612557 442 ntBASIC13.63□□□□□ -0.23
SEC61A1P61619 SPTSSB-204ENST00000617024 1292 ntBASIC13.63□□□□□ -0.23
SEC61A1P61619 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SEC61A1P61619 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.63□□□□□ -0.23
SEC61A1P61619 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 AC091951.1-201ENST00000512854 2465 ntBASIC13.63□□□□□ -0.23
SEC61A1P61619 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SEC61A1P61619 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SEC61A1P61619 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.63□□□□□ -0.23
SEC61A1P61619 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61A1P61619 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61A1P61619 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 FO538757.1-201ENST00000623083 1397 ntBASIC13.62□□□□□ -0.23
SEC61A1P61619 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61A1P61619 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.62□□□□□ -0.23
SEC61A1P61619 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.62□□□□□ -0.23
SEC61A1P61619 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.62□□□□□ -0.23
SEC61A1P61619 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61A1P61619 AC011467.4-201ENST00000594891 528 ntBASIC13.62□□□□□ -0.23
SEC61A1P61619 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61A1P61619 AC018529.1-201ENST00000613063 361 ntBASIC13.62□□□□□ -0.23
SEC61A1P61619 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61A1P61619 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61A1P61619 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.62□□□□□ -0.23
SEC61A1P61619 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.62□□□□□ -0.23
SEC61A1P61619 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.62□□□□□ -0.23
SEC61A1P61619 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SEC61A1P61619 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SEC61A1P61619 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SEC61A1P61619 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SEC61A1P61619 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SEC61A1P61619 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC61A1P61619 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SEC61A1P61619 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SEC61A1P61619 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC61A1P61619 HLA-H-201ENST00000383620 1096 ntBASIC13.61□□□□□ -0.23
SEC61A1P61619 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.61□□□□□ -0.23
SEC61A1P61619 AC093724.1-201ENST00000448659 1027 ntBASIC13.61□□□□□ -0.23
SEC61A1P61619 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC61A1P61619 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 IGHV3-42-201ENST00000520410 361 ntBASIC13.61□□□□□ -0.23
SEC61A1P61619 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.61□□□□□ -0.23
SEC61A1P61619 SPCS2P1-201ENST00000561636 679 ntBASIC13.61□□□□□ -0.23
SEC61A1P61619 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.61□□□□□ -0.23
SEC61A1P61619 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms