Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN20P56880 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDN20P56880 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 AL390755.1-201ENST00000623716 2027 ntBASIC14.21□□□□□ -0.13
CLDN20P56880 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CLDN20P56880 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.21□□□□□ -0.13
CLDN20P56880 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 TPRX2P-201ENST00000535362 881 ntBASIC14.21□□□□□ -0.13
CLDN20P56880 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLDN20P56880 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.21□□□□□ -0.13
CLDN20P56880 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CLDN20P56880 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDN20P56880 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDN20P56880 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CLDN20P56880 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDN20P56880 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLDN20P56880 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.21□□□□□ -0.13
CLDN20P56880 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.21□□□□□ -0.14
CLDN20P56880 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLDN20P56880 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLDN20P56880 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN20P56880 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN20P56880 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 AC005912.2-201ENST00000619492 2400 ntBASIC14.2□□□□□ -0.14
CLDN20P56880 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 LINC00552-201ENST00000625151 2579 ntBASIC14.2□□□□□ -0.14
CLDN20P56880 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLDN20P56880 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN20P56880 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLDN20P56880 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.2□□□□□ -0.14
CLDN20P56880 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN20P56880 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN20P56880 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN20P56880 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.2□□□□□ -0.14
CLDN20P56880 CRB3P1-201ENST00000449338 276 ntBASIC14.2□□□□□ -0.14
CLDN20P56880 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms