Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH8P55286 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH8P55286 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH8P55286 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH8P55286 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH8P55286 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH8P55286 GAPDHP21-201ENST00000450301 1010 ntBASIC16.44■□□□□ 0.22
CDH8P55286 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH8P55286 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.44■□□□□ 0.22
CDH8P55286 AC004066.1-201ENST00000502488 802 ntBASIC16.44■□□□□ 0.22
CDH8P55286 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH8P55286 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CDH8P55286 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CDH8P55286 SAMD11P1-201ENST00000571429 661 ntBASIC16.44■□□□□ 0.22
CDH8P55286 AL645728.2-202ENST00000641679 227 ntBASIC16.44■□□□□ 0.22
CDH8P55286 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDH8P55286 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH8P55286 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH8P55286 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH8P55286 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH8P55286 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH8P55286 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CDH8P55286 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH8P55286 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH8P55286 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CDH8P55286 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH8P55286 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 AC093433.1-201ENST00000458048 571 ntBASIC16.43■□□□□ 0.22
CDH8P55286 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH8P55286 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 CR383656.12-201ENST00000549567 513 ntBASIC16.43■□□□□ 0.22
CDH8P55286 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH8P55286 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH8P55286 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH8P55286 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH8P55286 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 AC093525.8-201ENST00000624099 1342 ntBASIC16.43■□□□□ 0.22
CDH8P55286 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH8P55286 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH8P55286 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH8P55286 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH8P55286 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH8P55286 AC104640.1-201ENST00000562617 2109 ntBASIC16.42■□□□□ 0.22
CDH8P55286 AL158070.2-201ENST00000623713 1621 ntBASIC16.42■□□□□ 0.22
CDH8P55286 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH8P55286 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH8P55286 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH8P55286 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH8P55286 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH8P55286 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH8P55286 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH8P55286 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH8P55286 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH8P55286 AC104457.1-201ENST00000401024 814 ntBASIC16.42■□□□□ 0.22
CDH8P55286 GHSR-202ENST00000427970 912 ntBASIC16.42■□□□□ 0.22
CDH8P55286 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH8P55286 AC244107.1-201ENST00000442033 332 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms