Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
UBE2AP49459 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC9.88□□□□□ -0.83
UBE2AP49459 IMP4-203ENST00000409935 958 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC9.88□□□□□ -0.83
UBE2AP49459 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2AP49459 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC9.88□□□□□ -0.83
UBE2AP49459 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
UBE2AP49459 EHF-205ENST00000527935 557 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2AP49459 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC9.88□□□□□ -0.83
UBE2AP49459 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
UBE2AP49459 NAA38-207ENST00000576861 556 ntTSL 3 BASIC9.88□□□□□ -0.83
UBE2AP49459 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
UBE2AP49459 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2AP49459 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC9.88□□□□□ -0.83
UBE2AP49459 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
UBE2AP49459 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC9.88□□□□□ -0.83
UBE2AP49459 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2AP49459 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC9.88□□□□□ -0.83
UBE2AP49459 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 REXO1L1P-202ENST00000608646 1974 ntBASIC9.87□□□□□ -0.83
UBE2AP49459 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 LOX-206ENST00000639739 1626 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 ALG1L5P-201ENST00000482043 771 ntBASIC9.87□□□□□ -0.83
UBE2AP49459 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC9.87□□□□□ -0.83
UBE2AP49459 CCDC74BP1-201ENST00000508880 1123 ntBASIC9.87□□□□□ -0.83
UBE2AP49459 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC9.87□□□□□ -0.83
UBE2AP49459 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 USP31-203ENST00000567975 2142 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
UBE2AP49459 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC9.87□□□□□ -0.83
UBE2AP49459 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC9.87□□□□□ -0.83
UBE2AP49459 AL450472.2-201ENST00000603663 1156 ntBASIC9.87□□□□□ -0.83
UBE2AP49459 AC003101.2-201ENST00000612557 442 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms