Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 AC012508.2-201ENST00000567613 1472 ntBASIC16.28■□□□□ 0.2
LHX1P48742 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LHX1P48742 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.28■□□□□ 0.2
LHX1P48742 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.28■□□□□ 0.2
LHX1P48742 C18orf15-201ENST00000623680 2534 ntBASIC16.27■□□□□ 0.2
LHX1P48742 AL138709.1-201ENST00000614840 1693 ntBASIC16.27■□□□□ 0.2
LHX1P48742 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LHX1P48742 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX1P48742 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX1P48742 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LHX1P48742 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LHX1P48742 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX1P48742 KRT223P-202ENST00000449164 1292 ntBASIC16.27■□□□□ 0.2
LHX1P48742 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.27■□□□□ 0.2
LHX1P48742 AC022616.1-201ENST00000518688 554 ntBASIC16.27■□□□□ 0.2
LHX1P48742 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.27■□□□□ 0.2
LHX1P48742 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX1P48742 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LHX1P48742 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.27■□□□□ 0.2
LHX1P48742 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.27■□□□□ 0.2
LHX1P48742 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.27■□□□□ 0.2
LHX1P48742 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.27■□□□□ 0.2
LHX1P48742 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LHX1P48742 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LHX1P48742 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LHX1P48742 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.27■□□□□ 0.19
LHX1P48742 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.27■□□□□ 0.19
LHX1P48742 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.27■□□□□ 0.19
LHX1P48742 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LHX1P48742 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
LHX1P48742 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LHX1P48742 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.26■□□□□ 0.19
LHX1P48742 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 KRT8P44-201ENST00000441609 1350 ntBASIC16.26■□□□□ 0.19
LHX1P48742 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LHX1P48742 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX1P48742 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
LHX1P48742 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LHX1P48742 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LHX1P48742 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LHX1P48742 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 ANKRD19P-201ENST00000338192 862 ntBASIC16.26■□□□□ 0.19
LHX1P48742 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LHX1P48742 CNN2P8-201ENST00000421872 913 ntBASIC16.26■□□□□ 0.19
LHX1P48742 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.26■□□□□ 0.19
LHX1P48742 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX1P48742 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.26■□□□□ 0.19
LHX1P48742 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.26■□□□□ 0.19
LHX1P48742 AC119751.2-201ENST00000504529 210 ntBASIC16.26■□□□□ 0.19
LHX1P48742 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.26■□□□□ 0.19
LHX1P48742 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.26■□□□□ 0.19
LHX1P48742 AC079316.1-201ENST00000548397 411 ntBASIC16.26■□□□□ 0.19
LHX1P48742 KRT90P-201ENST00000549264 1064 ntBASIC16.26■□□□□ 0.19
LHX1P48742 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LHX1P48742 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.26■□□□□ 0.19
LHX1P48742 AC244669.2-201ENST00000612320 853 ntBASIC16.26■□□□□ 0.19
LHX1P48742 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LHX1P48742 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LHX1P48742 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LHX1P48742 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms