Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 LINC02228-204ENST00000642115 2962 ntBASIC14.86□□□□□ -0.03
SLC6A12P48065 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC6A12P48065 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC6A12P48065 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A12P48065 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A12P48065 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC6A12P48065 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC6A12P48065 DFFBP1-201ENST00000433250 979 ntBASIC14.86□□□□□ -0.03
SLC6A12P48065 RPL13AP25-201ENST00000484130 612 ntBASIC14.86□□□□□ -0.03
SLC6A12P48065 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.86□□□□□ -0.03
SLC6A12P48065 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC6A12P48065 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.86□□□□□ -0.03
SLC6A12P48065 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
SLC6A12P48065 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC6A12P48065 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SLC6A12P48065 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.86□□□□□ -0.03
SLC6A12P48065 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC6A12P48065 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC6A12P48065 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC6A12P48065 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC6A12P48065 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SLC6A12P48065 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC6A12P48065 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 LILRP1-201ENST00000444199 1370 ntBASIC14.85□□□□□ -0.03
SLC6A12P48065 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 MIR661-201ENST00000384842 89 ntBASIC14.85□□□□□ -0.03
SLC6A12P48065 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A12P48065 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A12P48065 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 AC093813.1-201ENST00000605066 256 ntBASIC14.85□□□□□ -0.03
SLC6A12P48065 AC093726.1-201ENST00000608064 963 ntBASIC14.85□□□□□ -0.03
SLC6A12P48065 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A12P48065 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.85□□□□□ -0.03
SLC6A12P48065 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC6A12P48065 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC6A12P48065 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC6A12P48065 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC6A12P48065 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 FER1L4-210ENST00000615531 5998 ntBASIC14.84□□□□□ -0.03
SLC6A12P48065 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SLC6A12P48065 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC6A12P48065 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC6A12P48065 INTS4P2-202ENST00000614726 2019 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms