Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP13P45452 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP13P45452 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.09■□□□□ 0.17
MMP13P45452 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP13P45452 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP13P45452 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP13P45452 AC009477.1-201ENST00000452936 217 ntBASIC16.09■□□□□ 0.17
MMP13P45452 AC004890.2-204ENST00000481968 304 ntBASIC16.09■□□□□ 0.17
MMP13P45452 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP13P45452 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP13P45452 ZNF890P-202ENST00000530367 1156 ntBASIC16.09■□□□□ 0.17
MMP13P45452 AC044860.1-202ENST00000559481 777 ntBASIC16.09■□□□□ 0.17
MMP13P45452 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.09■□□□□ 0.17
MMP13P45452 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP13P45452 AC074044.1-201ENST00000609673 707 ntBASIC16.09■□□□□ 0.17
MMP13P45452 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MMP13P45452 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP13P45452 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 AC023024.2-201ENST00000623561 1993 ntBASIC16.09■□□□□ 0.17
MMP13P45452 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.09■□□□□ 0.17
MMP13P45452 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.09■□□□□ 0.17
MMP13P45452 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MMP13P45452 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MMP13P45452 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.08■□□□□ 0.17
MMP13P45452 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MMP13P45452 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.08■□□□□ 0.16
MMP13P45452 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.08■□□□□ 0.16
MMP13P45452 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MMP13P45452 AC074338.1-201ENST00000416825 156 ntBASIC16.08■□□□□ 0.16
MMP13P45452 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP13P45452 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.08■□□□□ 0.16
MMP13P45452 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.08■□□□□ 0.16
MMP13P45452 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP13P45452 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP13P45452 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.08■□□□□ 0.16
MMP13P45452 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.08■□□□□ 0.16
MMP13P45452 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.08■□□□□ 0.16
MMP13P45452 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MMP13P45452 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.08■□□□□ 0.16
MMP13P45452 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MMP13P45452 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 ZBED1P1-201ENST00000502364 1930 ntBASIC16.07■□□□□ 0.16
MMP13P45452 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MMP13P45452 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
MMP13P45452 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MMP13P45452 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.07■□□□□ 0.16
MMP13P45452 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
MMP13P45452 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MMP13P45452 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.07■□□□□ 0.16
MMP13P45452 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms