Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 PCDH8P1-201ENST00000428983 2773 ntBASIC19.44■□□□□ 0.7
ATP6V1AP38606 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 AP000593.2-201ENST00000542775 1433 ntBASIC19.44■□□□□ 0.7
ATP6V1AP38606 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 AC026434.2-201ENST00000506094 1078 ntBASIC19.44■□□□□ 0.7
ATP6V1AP38606 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 AC018635.2-201ENST00000608625 364 ntBASIC19.44■□□□□ 0.7
ATP6V1AP38606 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATP6V1AP38606 AC112504.1-201ENST00000623415 1841 ntBASIC19.44■□□□□ 0.7
ATP6V1AP38606 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP6V1AP38606 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.43■□□□□ 0.7
ATP6V1AP38606 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 AC125604.1-201ENST00000496255 707 ntBASIC19.43■□□□□ 0.7
ATP6V1AP38606 AC100827.2-201ENST00000563214 1194 ntBASIC19.43■□□□□ 0.7
ATP6V1AP38606 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 MIR3147-201ENST00000577811 66 ntBASIC19.43■□□□□ 0.7
ATP6V1AP38606 AC090164.2-201ENST00000611487 516 ntBASIC19.43■□□□□ 0.7
ATP6V1AP38606 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATP6V1AP38606 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
ATP6V1AP38606 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.42■□□□□ 0.7
ATP6V1AP38606 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 AC009955.4-201ENST00000597192 544 ntBASIC19.42■□□□□ 0.7
ATP6V1AP38606 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP6V1AP38606 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP6V1AP38606 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms