Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 AC093525.8-201ENST00000624099 1342 ntBASIC18.57■□□□□ 0.56
CHMLP26374 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMLP26374 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 VDAC1P7-201ENST00000462417 847 ntBASIC18.57■□□□□ 0.56
CHMLP26374 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 AC004066.1-201ENST00000502488 802 ntBASIC18.57■□□□□ 0.56
CHMLP26374 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMLP26374 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.57■□□□□ 0.56
CHMLP26374 RNA5SP421-201ENST00000516864 134 ntBASIC18.57■□□□□ 0.56
CHMLP26374 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.57■□□□□ 0.56
CHMLP26374 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.57■□□□□ 0.56
CHMLP26374 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.57■□□□□ 0.56
CHMLP26374 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.57■□□□□ 0.56
CHMLP26374 AL049840.4-201ENST00000602422 811 ntBASIC18.57■□□□□ 0.56
CHMLP26374 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.57■□□□□ 0.56
CHMLP26374 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CHMLP26374 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMLP26374 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CHMLP26374 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMLP26374 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMLP26374 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHMLP26374 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMLP26374 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMLP26374 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMLP26374 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHMLP26374 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMLP26374 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CHMLP26374 AL353779.1-201ENST00000434793 351 ntBASIC18.56■□□□□ 0.56
CHMLP26374 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMLP26374 INGX-202ENST00000489074 768 ntBASIC18.56■□□□□ 0.56
CHMLP26374 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMLP26374 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.56■□□□□ 0.56
CHMLP26374 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.56■□□□□ 0.56
CHMLP26374 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMLP26374 BRI3BPP1-201ENST00000594224 787 ntBASIC18.56■□□□□ 0.56
CHMLP26374 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMLP26374 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CHMLP26374 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 LINC00552-201ENST00000625151 2579 ntBASIC18.56■□□□□ 0.56
CHMLP26374 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
CHMLP26374 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMLP26374 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMLP26374 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 LILRP1-201ENST00000444199 1370 ntBASIC18.55■□□□□ 0.56
CHMLP26374 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMLP26374 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.55■□□□□ 0.56
CHMLP26374 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.55■□□□□ 0.56
CHMLP26374 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHMLP26374 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CHMLP26374 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 AL138799.1-201ENST00000448213 1675 ntBASIC18.55■□□□□ 0.56
CHMLP26374 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHMLP26374 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms