Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP8P22894 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP8P22894 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
MMP8P22894 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP8P22894 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MMP8P22894 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.2■□□□□ 0.18
MMP8P22894 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP8P22894 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP8P22894 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP8P22894 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP8P22894 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
MMP8P22894 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP8P22894 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP8P22894 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP8P22894 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP8P22894 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MMP8P22894 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MMP8P22894 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 BCRP1-201ENST00000444246 691 ntBASIC16.2■□□□□ 0.18
MMP8P22894 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 RPL13AP25-201ENST00000484130 612 ntBASIC16.2■□□□□ 0.18
MMP8P22894 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP8P22894 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP8P22894 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MMP8P22894 AL096865.1-201ENST00000606796 927 ntBASIC16.2■□□□□ 0.18
MMP8P22894 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP8P22894 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP8P22894 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MMP8P22894 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP8P22894 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MMP8P22894 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP8P22894 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP8P22894 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
MMP8P22894 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MMP8P22894 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MMP8P22894 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 FAM207CP-201ENST00000443486 507 ntBASIC16.19■□□□□ 0.18
MMP8P22894 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 SPCS2P1-201ENST00000561636 679 ntBASIC16.19■□□□□ 0.18
MMP8P22894 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP8P22894 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.19■□□□□ 0.18
MMP8P22894 AC093726.1-201ENST00000608064 963 ntBASIC16.19■□□□□ 0.18
MMP8P22894 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP8P22894 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MMP8P22894 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP8P22894 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP8P22894 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP8P22894 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP8P22894 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms