Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH3P22223 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH3P22223 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.23■□□□□ 0.03
CDH3P22223 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDH3P22223 CHCHD2P3-201ENST00000603038 451 ntBASIC15.23■□□□□ 0.03
CDH3P22223 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.23■□□□□ 0.03
CDH3P22223 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 AL161772.1-201ENST00000610494 4412 ntBASIC15.23■□□□□ 0.03
CDH3P22223 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CDH3P22223 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDH3P22223 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.23■□□□□ 0.03
CDH3P22223 SBF1P1-201ENST00000444527 5631 ntBASIC15.23■□□□□ 0.03
CDH3P22223 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 AC018892.3-201ENST00000623986 2499 ntBASIC15.22■□□□□ 0.03
CDH3P22223 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CDH3P22223 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.22■□□□□ 0.03
CDH3P22223 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.22■□□□□ 0.03
CDH3P22223 HNRNPUP1-201ENST00000554987 333 ntBASIC15.22■□□□□ 0.03
CDH3P22223 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CDH3P22223 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 AC008494.3-201ENST00000606615 944 ntBASIC15.22■□□□□ 0.03
CDH3P22223 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.22■□□□□ 0.03
CDH3P22223 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH3P22223 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH3P22223 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH3P22223 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 AP003680.1-201ENST00000598970 3660 ntBASIC15.21■□□□□ 0.03
CDH3P22223 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 AC069224.1-201ENST00000566372 1715 ntBASIC15.21■□□□□ 0.03
CDH3P22223 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDH3P22223 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 AC074338.1-201ENST00000416825 156 ntBASIC15.21■□□□□ 0.03
CDH3P22223 AC136604.1-201ENST00000418535 575 ntBASIC15.21■□□□□ 0.03
CDH3P22223 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 RPL13P2-201ENST00000440687 659 ntBASIC15.21■□□□□ 0.03
CDH3P22223 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms