Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC130P13994 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC130P13994 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC130P13994 AC007389.4-201ENST00000454674 793 ntBASIC16.34■□□□□ 0.21
CCDC130P13994 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC130P13994 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC130P13994 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC130P13994 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CCDC130P13994 TDH-203ENST00000531764 1110 ntBASIC16.34■□□□□ 0.21
CCDC130P13994 ENPP7P5-201ENST00000541031 1031 ntBASIC16.34■□□□□ 0.21
CCDC130P13994 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC130P13994 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC130P13994 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC130P13994 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC130P13994 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC130P13994 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC130P13994 AC008735.3-201ENST00000596646 500 ntBASIC16.34■□□□□ 0.21
CCDC130P13994 AC239800.4-201ENST00000603712 296 ntBASIC16.34■□□□□ 0.21
CCDC130P13994 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC130P13994 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC130P13994 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC130P13994 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC130P13994 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC130P13994 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC130P13994 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC130P13994 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CCDC130P13994 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CCDC130P13994 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC130P13994 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC130P13994 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
CCDC130P13994 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC130P13994 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC130P13994 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC130P13994 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC130P13994 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCDC130P13994 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC130P13994 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC130P13994 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC130P13994 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC130P13994 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC130P13994 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC130P13994 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC130P13994 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC130P13994 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC130P13994 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC130P13994 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCDC130P13994 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC130P13994 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC130P13994 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC130P13994 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC130P13994 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC130P13994 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC130P13994 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC130P13994 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms