Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.38□□□□□ -0.11
UBL4AP11441 ZNF890P-202ENST00000530367 1156 ntBASIC14.38□□□□□ -0.11
UBL4AP11441 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.38□□□□□ -0.11
UBL4AP11441 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
UBL4AP11441 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.38□□□□□ -0.11
UBL4AP11441 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.38□□□□□ -0.11
UBL4AP11441 AC138649.4-201ENST00000612222 287 ntBASIC14.38□□□□□ -0.11
UBL4AP11441 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBL4AP11441 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.38□□□□□ -0.11
UBL4AP11441 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBL4AP11441 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBL4AP11441 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBL4AP11441 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBL4AP11441 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBL4AP11441 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.38□□□□□ -0.11
UBL4AP11441 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
UBL4AP11441 AC013268.4-201ENST00000637413 2228 ntBASIC14.38□□□□□ -0.11
UBL4AP11441 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBL4AP11441 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
UBL4AP11441 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
UBL4AP11441 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.37□□□□□ -0.11
UBL4AP11441 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.37□□□□□ -0.11
UBL4AP11441 AC015922.1-201ENST00000421102 1152 ntBASIC14.37□□□□□ -0.11
UBL4AP11441 RPL13P2-201ENST00000440687 659 ntBASIC14.37□□□□□ -0.11
UBL4AP11441 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.37□□□□□ -0.11
UBL4AP11441 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.37□□□□□ -0.11
UBL4AP11441 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.37□□□□□ -0.11
UBL4AP11441 AC044860.1-202ENST00000559481 777 ntBASIC14.37□□□□□ -0.11
UBL4AP11441 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.37□□□□□ -0.11
UBL4AP11441 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.37□□□□□ -0.11
UBL4AP11441 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.37□□□□□ -0.11
UBL4AP11441 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.37□□□□□ -0.11
UBL4AP11441 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
UBL4AP11441 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.37□□□□□ -0.11
UBL4AP11441 AL139385.1-201ENST00000611744 3272 ntBASIC14.37□□□□□ -0.11
UBL4AP11441 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBL4AP11441 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.36□□□□□ -0.11
UBL4AP11441 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.36□□□□□ -0.11
UBL4AP11441 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBL4AP11441 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBL4AP11441 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.36□□□□□ -0.11
UBL4AP11441 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.36□□□□□ -0.11
UBL4AP11441 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.36□□□□□ -0.11
UBL4AP11441 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UBL4AP11441 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.36□□□□□ -0.11
UBL4AP11441 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
UBL4AP11441 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.36□□□□□ -0.11
UBL4AP11441 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.36□□□□□ -0.11
UBL4AP11441 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms