Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 SBF1P1-201ENST00000444527 5631 ntBASIC16.79■□□□□ 0.28
CCDC172P0C7W6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 SLED1-202ENST00000512051 380 ntBASIC16.79■□□□□ 0.28
CCDC172P0C7W6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC172P0C7W6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 MROH4P-201ENST00000431302 1578 ntBASIC16.78■□□□□ 0.28
CCDC172P0C7W6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 AC107918.4-201ENST00000641966 3141 ntBASIC16.78■□□□□ 0.28
CCDC172P0C7W6 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC172P0C7W6 Z97205.2-201ENST00000564697 1639 ntBASIC16.78■□□□□ 0.28
CCDC172P0C7W6 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms