Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.46■□□□□ 0.55
CHGBP05060 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CHGBP05060 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.46■□□□□ 0.55
CHGBP05060 AC004466.1-201ENST00000599515 1080 ntBASIC18.46■□□□□ 0.55
CHGBP05060 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.46■□□□□ 0.55
CHGBP05060 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHGBP05060 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CHGBP05060 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CHGBP05060 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.46■□□□□ 0.55
CHGBP05060 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.46■□□□□ 0.54
CHGBP05060 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CHGBP05060 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CHGBP05060 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.45■□□□□ 0.54
CHGBP05060 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 EIF3FP3-201ENST00000434851 1086 ntBASIC18.45■□□□□ 0.54
CHGBP05060 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 FTH1P14-201ENST00000482930 551 ntBASIC18.45■□□□□ 0.54
CHGBP05060 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.45■□□□□ 0.54
CHGBP05060 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.45■□□□□ 0.54
CHGBP05060 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.45■□□□□ 0.54
CHGBP05060 AC233724.13-201ENST00000598383 410 ntBASIC18.45■□□□□ 0.54
CHGBP05060 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.45■□□□□ 0.54
CHGBP05060 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 PRSS30P-206ENST00000641773 873 ntBASIC18.45■□□□□ 0.54
CHGBP05060 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.45■□□□□ 0.54
CHGBP05060 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHGBP05060 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.45■□□□□ 0.54
CHGBP05060 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHGBP05060 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHGBP05060 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHGBP05060 TCAF2P1-201ENST00000291129 2421 ntBASIC18.44■□□□□ 0.54
CHGBP05060 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.44■□□□□ 0.54
CHGBP05060 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CHGBP05060 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.44■□□□□ 0.54
CHGBP05060 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.44■□□□□ 0.54
CHGBP05060 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CHGBP05060 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.44■□□□□ 0.54
CHGBP05060 MIR1909-201ENST00000411312 80 ntBASIC18.44■□□□□ 0.54
CHGBP05060 ARSEP1-201ENST00000420443 635 ntBASIC18.44■□□□□ 0.54
CHGBP05060 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.44■□□□□ 0.54
CHGBP05060 ACA64.2-201ENST00000459014 129 ntBASIC18.44■□□□□ 0.54
CHGBP05060 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.44■□□□□ 0.54
CHGBP05060 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHGBP05060 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHGBP05060 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.44■□□□□ 0.54
CHGBP05060 AGAP7P-201ENST00000582299 2062 ntBASIC18.44■□□□□ 0.54
CHGBP05060 AC023157.3-201ENST00000619086 2088 ntBASIC18.44■□□□□ 0.54
CHGBP05060 AGAP14-201ENST00000624701 2060 ntBASIC18.44■□□□□ 0.54
CHGBP05060 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.44■□□□□ 0.54
CHGBP05060 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.44■□□□□ 0.54
CHGBP05060 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms