Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
APOC1P02654 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
APOC1P02654 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
APOC1P02654 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
APOC1P02654 RPSAP43-201ENST00000402237 625 ntBASIC13.75□□□□□ -0.21
APOC1P02654 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC1P02654 AC112482.1-201ENST00000492080 688 ntBASIC13.75□□□□□ -0.21
APOC1P02654 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 AC010327.4-202ENST00000591484 748 ntBASIC13.75□□□□□ -0.21
APOC1P02654 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.75□□□□□ -0.21
APOC1P02654 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC1P02654 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
APOC1P02654 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC1P02654 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC1P02654 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
APOC1P02654 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.75□□□□□ -0.21
APOC1P02654 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.75□□□□□ -0.21
APOC1P02654 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
APOC1P02654 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
APOC1P02654 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
APOC1P02654 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
APOC1P02654 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
APOC1P02654 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.74□□□□□ -0.21
APOC1P02654 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC1P02654 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 MTND6P24-201ENST00000440466 518 ntBASIC13.74□□□□□ -0.21
APOC1P02654 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 SPDYE14P-201ENST00000442619 822 ntBASIC13.74□□□□□ -0.21
APOC1P02654 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.74□□□□□ -0.21
APOC1P02654 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC1P02654 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC1P02654 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
APOC1P02654 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.74□□□□□ -0.21
APOC1P02654 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 MIR6080-201ENST00000617359 66 ntBASIC13.74□□□□□ -0.21
APOC1P02654 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC1P02654 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.74□□□□□ -0.21
APOC1P02654 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
APOC1P02654 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
APOC1P02654 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.73□□□□□ -0.21
APOC1P02654 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.73□□□□□ -0.21
APOC1P02654 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
APOC1P02654 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms