Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.28■□□□□ 0.52
COL1A1P02452 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.28■□□□□ 0.52
COL1A1P02452 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 AL358472.3-201ENST00000608147 415 ntBASIC18.28■□□□□ 0.52
COL1A1P02452 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.28■□□□□ 0.52
COL1A1P02452 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.28■□□□□ 0.52
COL1A1P02452 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL1A1P02452 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL1A1P02452 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.28■□□□□ 0.52
COL1A1P02452 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL1A1P02452 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.27■□□□□ 0.52
COL1A1P02452 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.27■□□□□ 0.52
COL1A1P02452 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.27■□□□□ 0.52
COL1A1P02452 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 AC016700.1-201ENST00000429424 312 ntBASIC18.27■□□□□ 0.52
COL1A1P02452 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.27■□□□□ 0.52
COL1A1P02452 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.27■□□□□ 0.52
COL1A1P02452 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.27■□□□□ 0.52
COL1A1P02452 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL1A1P02452 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.27■□□□□ 0.52
COL1A1P02452 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL1A1P02452 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 TMBIM7P-203ENST00000641617 1718 ntBASIC18.27■□□□□ 0.52
COL1A1P02452 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 PAUPAR-201ENST00000630360 2965 ntBASIC18.27■□□□□ 0.52
COL1A1P02452 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.27■□□□□ 0.52
COL1A1P02452 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL1A1P02452 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.27■□□□□ 0.52
COL1A1P02452 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.27■□□□□ 0.52
COL1A1P02452 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.27■□□□□ 0.51
COL1A1P02452 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.27■□□□□ 0.51
COL1A1P02452 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL1A1P02452 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL1A1P02452 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL1A1P02452 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL1A1P02452 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.27■□□□□ 0.51
COL1A1P02452 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL1A1P02452 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.27■□□□□ 0.51
COL1A1P02452 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
COL1A1P02452 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.26■□□□□ 0.51
COL1A1P02452 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
COL1A1P02452 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 RN7SL769P-201ENST00000469386 295 ntBASIC18.26■□□□□ 0.51
COL1A1P02452 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.26■□□□□ 0.51
COL1A1P02452 MROH4P-201ENST00000431302 1578 ntBASIC18.26■□□□□ 0.51
COL1A1P02452 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 AC126365.1-201ENST00000578585 1514 ntBASIC18.26■□□□□ 0.51
COL1A1P02452 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.26■□□□□ 0.51
COL1A1P02452 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.26■□□□□ 0.51
COL1A1P02452 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 LILRP1-201ENST00000444199 1370 ntBASIC18.26■□□□□ 0.51
COL1A1P02452 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.26■□□□□ 0.51
COL1A1P02452 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.26■□□□□ 0.51
COL1A1P02452 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
COL1A1P02452 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL1A1P02452 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.26■□□□□ 0.51
COL1A1P02452 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms