Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 KRT8P22-201ENST00000562317 1415 ntBASIC16.57■□□□□ 0.24
HLA-DRAP01903 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 WASH3P-207ENST00000560956 1394 ntBASIC16.57■□□□□ 0.24
HLA-DRAP01903 AC093525.8-201ENST00000624099 1342 ntBASIC16.57■□□□□ 0.24
HLA-DRAP01903 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 AC133539.2-201ENST00000604757 467 ntBASIC16.57■□□□□ 0.24
HLA-DRAP01903 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HLA-DRAP01903 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.57■□□□□ 0.24
HLA-DRAP01903 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.57■□□□□ 0.24
HLA-DRAP01903 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 AC012508.2-201ENST00000567613 1472 ntBASIC16.56■□□□□ 0.24
HLA-DRAP01903 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.56■□□□□ 0.24
HLA-DRAP01903 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 SOCS2P1-201ENST00000417727 557 ntBASIC16.56■□□□□ 0.24
HLA-DRAP01903 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HLA-DRAP01903 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HLA-DRAP01903 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HLA-DRAP01903 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.55■□□□□ 0.24
HLA-DRAP01903 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms