Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 RNA5SP419-201ENST00000515908 135 ntBASIC13.13□□□□□ -0.31
HLA-AP01891 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 AL662844.1-201ENST00000546340 181 ntBASIC13.13□□□□□ -0.31
HLA-AP01891 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HLA-AP01891 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.13□□□□□ -0.31
HLA-AP01891 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 AC005593.1-201ENST00000624894 515 ntBASIC13.13□□□□□ -0.31
HLA-AP01891 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.13□□□□□ -0.31
HLA-AP01891 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-AP01891 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-AP01891 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-AP01891 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.12□□□□□ -0.31
HLA-AP01891 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 HMGA1P7-201ENST00000406908 502 ntBASIC13.12□□□□□ -0.31
HLA-AP01891 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.12□□□□□ -0.31
HLA-AP01891 AC098831.1-202ENST00000438821 336 ntBASIC13.12□□□□□ -0.31
HLA-AP01891 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.12□□□□□ -0.31
HLA-AP01891 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.12□□□□□ -0.31
HLA-AP01891 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.12□□□□□ -0.31
HLA-AP01891 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.12□□□□□ -0.31
HLA-AP01891 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
HLA-AP01891 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HLA-AP01891 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.12□□□□□ -0.31
HLA-AP01891 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HLA-AP01891 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
HLA-AP01891 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-AP01891 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-AP01891 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HLA-AP01891 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.11□□□□□ -0.31
HLA-AP01891 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-AP01891 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HLA-AP01891 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.11□□□□□ -0.31
HLA-AP01891 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-AP01891 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms