Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.57■□□□□ 0.08
VAPBO95292 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VAPBO95292 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VAPBO95292 AL121723.1-201ENST00000445194 1519 ntBASIC15.57■□□□□ 0.08
VAPBO95292 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.57■□□□□ 0.08
VAPBO95292 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.57■□□□□ 0.08
VAPBO95292 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VAPBO95292 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VAPBO95292 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 ZBED1P1-201ENST00000502364 1930 ntBASIC15.56■□□□□ 0.08
VAPBO95292 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.56■□□□□ 0.08
VAPBO95292 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.56■□□□□ 0.08
VAPBO95292 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VAPBO95292 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VAPBO95292 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 SNX18-202ENST00000343017 3140 ntBASIC15.56■□□□□ 0.08
VAPBO95292 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
VAPBO95292 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.56■□□□□ 0.08
VAPBO95292 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.56■□□□□ 0.08
VAPBO95292 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.56■□□□□ 0.08
VAPBO95292 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.56■□□□□ 0.08
VAPBO95292 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.56■□□□□ 0.08
VAPBO95292 IGHV3-42-201ENST00000520410 361 ntBASIC15.56■□□□□ 0.08
VAPBO95292 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.56■□□□□ 0.08
VAPBO95292 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.56■□□□□ 0.08
VAPBO95292 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
VAPBO95292 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.56■□□□□ 0.08
VAPBO95292 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 AC023908.3-201ENST00000564211 3047 ntBASIC15.56■□□□□ 0.08
VAPBO95292 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.56■□□□□ 0.08
VAPBO95292 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VAPBO95292 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VAPBO95292 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VAPBO95292 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 AC138969.3-201ENST00000546612 1459 ntBASIC15.55■□□□□ 0.08
VAPBO95292 AC138932.2-201ENST00000548268 1459 ntBASIC15.55■□□□□ 0.08
VAPBO95292 AC126755.4-201ENST00000549796 1459 ntBASIC15.55■□□□□ 0.08
VAPBO95292 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.55■□□□□ 0.08
VAPBO95292 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.55■□□□□ 0.08
VAPBO95292 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.55■□□□□ 0.08
VAPBO95292 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.55■□□□□ 0.08
VAPBO95292 KRT18P43-201ENST00000469825 1281 ntBASIC15.55■□□□□ 0.08
VAPBO95292 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.55■□□□□ 0.08
VAPBO95292 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VAPBO95292 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.55■□□□□ 0.08
VAPBO95292 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.55■□□□□ 0.08
VAPBO95292 AC025181.2-201ENST00000606994 802 ntBASIC15.55■□□□□ 0.08
VAPBO95292 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.55■□□□□ 0.08
VAPBO95292 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.55■□□□□ 0.08
VAPBO95292 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VAPBO95292 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
VAPBO95292 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VAPBO95292 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VAPBO95292 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VAPBO95292 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VAPBO95292 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VAPBO95292 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.54■□□□□ 0.08
VAPBO95292 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
VAPBO95292 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms