Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
DFFBO76075 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.68□□□□□ -0.38
DFFBO76075 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
DFFBO76075 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.68□□□□□ -0.38
DFFBO76075 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
DFFBO76075 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.68□□□□□ -0.38
DFFBO76075 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DFFBO76075 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DFFBO76075 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.68□□□□□ -0.38
DFFBO76075 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
DFFBO76075 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DFFBO76075 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.67□□□□□ -0.38
DFFBO76075 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 BX640514.1-201ENST00000583223 1918 ntBASIC12.67□□□□□ -0.38
DFFBO76075 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.67□□□□□ -0.38
DFFBO76075 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DFFBO76075 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
DFFBO76075 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.67□□□□□ -0.38
DFFBO76075 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.67□□□□□ -0.38
DFFBO76075 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.67□□□□□ -0.38
DFFBO76075 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.67□□□□□ -0.38
DFFBO76075 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.67□□□□□ -0.38
DFFBO76075 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.67□□□□□ -0.38
DFFBO76075 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.67□□□□□ -0.38
DFFBO76075 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 AC104109.2-201ENST00000602919 1418 ntBASIC12.67□□□□□ -0.38
DFFBO76075 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.67□□□□□ -0.38
DFFBO76075 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DFFBO76075 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 AL589702.1-201ENST00000641229 1509 ntBASIC12.67□□□□□ -0.38
DFFBO76075 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DFFBO76075 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.66□□□□□ -0.38
DFFBO76075 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
DFFBO76075 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 AC117489.1-201ENST00000625169 3217 ntBASIC12.66□□□□□ -0.38
DFFBO76075 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.66□□□□□ -0.38
DFFBO76075 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
DFFBO76075 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.66□□□□□ -0.38
DFFBO76075 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
DFFBO76075 AL590627.1-203ENST00000421194 1026 ntBASIC12.66□□□□□ -0.38
DFFBO76075 RPL13AP23-201ENST00000480739 586 ntBASIC12.66□□□□□ -0.38
DFFBO76075 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.66□□□□□ -0.38
DFFBO76075 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.66□□□□□ -0.38
DFFBO76075 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.66□□□□□ -0.38
DFFBO76075 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.66□□□□□ -0.38
DFFBO76075 AC145285.3-201ENST00000564603 959 ntBASIC12.66□□□□□ -0.38
DFFBO76075 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
DFFBO76075 MIR4313-201ENST00000580760 101 ntBASIC12.66□□□□□ -0.38
DFFBO76075 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.66□□□□□ -0.38
DFFBO76075 BX640515.1-201ENST00000617215 977 ntBASIC12.66□□□□□ -0.38
DFFBO76075 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.66□□□□□ -0.38
DFFBO76075 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.66□□□□□ -0.38
DFFBO76075 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
DFFBO76075 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms