Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.93■□□□□ 0.46
CTNND1O60716 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CTNND1O60716 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CTNND1O60716 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.93■□□□□ 0.46
CTNND1O60716 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CTNND1O60716 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CTNND1O60716 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.92■□□□□ 0.46
CTNND1O60716 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.92■□□□□ 0.46
CTNND1O60716 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.92■□□□□ 0.46
CTNND1O60716 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CTNND1O60716 AC092506.1-202ENST00000401022 528 ntBASIC17.92■□□□□ 0.46
CTNND1O60716 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.92■□□□□ 0.46
CTNND1O60716 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.92■□□□□ 0.46
CTNND1O60716 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.92■□□□□ 0.46
CTNND1O60716 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.92■□□□□ 0.46
CTNND1O60716 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CTNND1O60716 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.92■□□□□ 0.46
CTNND1O60716 HIST2H2BC-201ENST00000498492 580 ntBASIC17.92■□□□□ 0.46
CTNND1O60716 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.92■□□□□ 0.46
CTNND1O60716 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.92■□□□□ 0.46
CTNND1O60716 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.92■□□□□ 0.46
CTNND1O60716 AC073413.1-201ENST00000603927 732 ntBASIC17.92■□□□□ 0.46
CTNND1O60716 AL451050.2-201ENST00000606967 682 ntBASIC17.92■□□□□ 0.46
CTNND1O60716 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.92■□□□□ 0.46
CTNND1O60716 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.92■□□□□ 0.46
CTNND1O60716 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.92■□□□□ 0.46
CTNND1O60716 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTNND1O60716 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNND1O60716 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTNND1O60716 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CTNND1O60716 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CTNND1O60716 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNND1O60716 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.91■□□□□ 0.46
CTNND1O60716 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNND1O60716 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNND1O60716 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 AL603832.2-201ENST00000566195 2125 ntBASIC17.91■□□□□ 0.46
CTNND1O60716 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNND1O60716 AC007663.3-201ENST00000609632 465 ntBASIC17.91■□□□□ 0.46
CTNND1O60716 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNND1O60716 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNND1O60716 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CTNND1O60716 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNND1O60716 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.91■□□□□ 0.46
CTNND1O60716 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.91■□□□□ 0.46
CTNND1O60716 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTNND1O60716 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTNND1O60716 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.9■□□□□ 0.46
CTNND1O60716 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.9■□□□□ 0.46
CTNND1O60716 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.9■□□□□ 0.46
CTNND1O60716 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTNND1O60716 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.9■□□□□ 0.46
CTNND1O60716 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms