Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RNF13O43567 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RNF13O43567 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF13O43567 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF13O43567 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RNF13O43567 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF13O43567 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.13□□□□□ -0.15
RNF13O43567 Z92544.3-201ENST00000624747 417 ntBASIC14.13□□□□□ -0.15
RNF13O43567 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RNF13O43567 AC007686.3-201ENST00000619017 3487 ntBASIC14.13□□□□□ -0.15
RNF13O43567 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.13□□□□□ -0.15
RNF13O43567 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RNF13O43567 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.13□□□□□ -0.15
RNF13O43567 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.13□□□□□ -0.15
RNF13O43567 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RNF13O43567 FGD5P1-202ENST00000614866 2498 ntBASIC14.13□□□□□ -0.15
RNF13O43567 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RNF13O43567 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RNF13O43567 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RNF13O43567 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 AC125807.1-201ENST00000483097 614 ntBASIC14.12□□□□□ -0.15
RNF13O43567 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.12□□□□□ -0.15
RNF13O43567 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.12□□□□□ -0.15
RNF13O43567 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RNF13O43567 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 TUBB3P1-201ENST00000405796 1332 ntBASIC14.12□□□□□ -0.15
RNF13O43567 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF13O43567 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RNF13O43567 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF13O43567 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms