Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.13□□□□□ -0.63
PAX4O43316 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.13□□□□□ -0.63
PAX4O43316 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
PAX4O43316 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.13□□□□□ -0.63
PAX4O43316 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 CICP13-201ENST00000422015 2789 ntBASIC11.13□□□□□ -0.63
PAX4O43316 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
PAX4O43316 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
PAX4O43316 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.13□□□□□ -0.63
PAX4O43316 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.13□□□□□ -0.63
PAX4O43316 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.13□□□□□ -0.63
PAX4O43316 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.13□□□□□ -0.63
PAX4O43316 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.13□□□□□ -0.63
PAX4O43316 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
PAX4O43316 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 AC131212.3-201ENST00000624087 4219 ntBASIC11.12□□□□□ -0.63
PAX4O43316 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.12□□□□□ -0.63
PAX4O43316 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.12□□□□□ -0.63
PAX4O43316 BASP1P1-201ENST00000430708 665 ntBASIC11.12□□□□□ -0.63
PAX4O43316 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.12□□□□□ -0.63
PAX4O43316 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 AC006518.1-201ENST00000541449 943 ntBASIC11.12□□□□□ -0.63
PAX4O43316 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.12□□□□□ -0.63
PAX4O43316 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.12□□□□□ -0.63
PAX4O43316 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
PAX4O43316 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 MIR4313-201ENST00000580760 101 ntBASIC11.12□□□□□ -0.63
PAX4O43316 AL390754.1-201ENST00000619088 582 ntBASIC11.12□□□□□ -0.63
PAX4O43316 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms