Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DDX39AO00148 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.35■□□□□ 0.37
DDX39AO00148 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX39AO00148 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DDX39AO00148 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DDX39AO00148 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
DDX39AO00148 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX39AO00148 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 RNU1-114P-201ENST00000365297 166 ntBASIC17.34■□□□□ 0.37
DDX39AO00148 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
DDX39AO00148 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX39AO00148 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX39AO00148 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.34■□□□□ 0.37
DDX39AO00148 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX39AO00148 PDIA3P1-201ENST00000471856 1510 ntBASIC17.34■□□□□ 0.37
DDX39AO00148 FTH1P14-201ENST00000482930 551 ntBASIC17.34■□□□□ 0.37
DDX39AO00148 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
DDX39AO00148 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX39AO00148 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX39AO00148 MIR4259-201ENST00000584466 101 ntBASIC17.34■□□□□ 0.37
DDX39AO00148 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX39AO00148 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.34■□□□□ 0.37
DDX39AO00148 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX39AO00148 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX39AO00148 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX39AO00148 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
DDX39AO00148 AC020658.6-201ENST00000623564 1870 ntBASIC17.34■□□□□ 0.37
DDX39AO00148 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX39AO00148 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DDX39AO00148 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX39AO00148 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DDX39AO00148 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.33■□□□□ 0.37
DDX39AO00148 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX39AO00148 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX39AO00148 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DDX39AO00148 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX39AO00148 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX39AO00148 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX39AO00148 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
DDX39AO00148 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.33■□□□□ 0.36
DDX39AO00148 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 AC022137.2-201ENST00000503482 481 ntBASIC17.33■□□□□ 0.36
DDX39AO00148 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.33■□□□□ 0.36
DDX39AO00148 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.33■□□□□ 0.36
DDX39AO00148 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.33■□□□□ 0.36
DDX39AO00148 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.33■□□□□ 0.36
DDX39AO00148 AC244669.2-201ENST00000612320 853 ntBASIC17.33■□□□□ 0.36
DDX39AO00148 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.33■□□□□ 0.36
DDX39AO00148 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.33■□□□□ 0.36
DDX39AO00148 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.33■□□□□ 0.36
DDX39AO00148 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.33■□□□□ 0.36
DDX39AO00148 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX39AO00148 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
DDX39AO00148 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.33■□□□□ 0.36
DDX39AO00148 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX39AO00148 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.32■□□□□ 0.36
DDX39AO00148 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 AL359258.3-201ENST00000622910 2331 ntBASIC17.32■□□□□ 0.36
DDX39AO00148 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
DDX39AO00148 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX39AO00148 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX39AO00148 AC005229.1-201ENST00000392885 409 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms