Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 AL442647.2-201ENST00000429864 857 ntBASIC13.64□□□□□ -0.23
NPIPB4C9JG80 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 AL603764.1-201ENST00000636452 321 ntBASIC13.64□□□□□ -0.23
NPIPB4C9JG80 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPB4C9JG80 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AC011270.2-201ENST00000624293 2550 ntBASIC13.63□□□□□ -0.23
NPIPB4C9JG80 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 SLC7A15P-201ENST00000424028 1363 ntBASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AL391825.1-201ENST00000457671 1364 ntBASIC13.63□□□□□ -0.23
NPIPB4C9JG80 SPDYE19P-201ENST00000338590 713 ntBASIC13.63□□□□□ -0.23
NPIPB4C9JG80 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 DFFBP1-201ENST00000433250 979 ntBASIC13.63□□□□□ -0.23
NPIPB4C9JG80 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.63□□□□□ -0.23
NPIPB4C9JG80 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPB4C9JG80 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPB4C9JG80 HLA-K-203ENST00000430151 1046 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms