Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.62□□□□□ -0.55
KNCNA6PVL3 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.62□□□□□ -0.55
KNCNA6PVL3 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.62□□□□□ -0.55
KNCNA6PVL3 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.62□□□□□ -0.55
KNCNA6PVL3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 BTBD7P1-201ENST00000447253 1453 ntBASIC11.62□□□□□ -0.55
KNCNA6PVL3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
KNCNA6PVL3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
KNCNA6PVL3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 SPDYE19P-201ENST00000338590 713 ntBASIC11.61□□□□□ -0.55
KNCNA6PVL3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
KNCNA6PVL3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
KNCNA6PVL3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms