Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC01546A6NGU7 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TSPY19P-201ENST00000418461 509 ntBASIC10.86□□□□□ -0.67
LINC01546A6NGU7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ATP5G2P1-201ENST00000433580 426 ntBASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TSPY18P-201ENST00000441642 509 ntBASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 NME4-207ENST00000450036 985 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 AC015910.1-201ENST00000579400 975 ntBASIC10.86□□□□□ -0.67
LINC01546A6NGU7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 AC026979.3-201ENST00000607315 403 ntBASIC10.86□□□□□ -0.67
LINC01546A6NGU7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 REXO1L6P-202ENST00000619970 1078 ntBASIC10.86□□□□□ -0.67
LINC01546A6NGU7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 AL023775.1-201ENST00000454907 1746 ntBASIC10.86□□□□□ -0.67
LINC01546A6NGU7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
LINC01546A6NGU7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC10.85□□□□□ -0.67
LINC01546A6NGU7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms