Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 SSR4P1-203ENST00000599569 2260 ntBASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HLA-DRB4X5D2U9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 AC092127.1-201ENST00000567093 3455 ntBASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 AC027369.6-201ENST00000525520 931 ntBASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
HLA-DRB4X5D2U9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 AC105250.1-201ENST00000509378 2057 ntBASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
HLA-DRB4X5D2U9 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AC087481.3-201ENST00000602886 1894 ntBASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms