Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 CICP20-201ENST00000443330 2801 ntBASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.02□□□□□ -0.33
KCNIP3Q9Y2W7 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 PHKG1P2-201ENST00000457537 863 ntBASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 AC107918.4-201ENST00000641966 3141 ntBASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
KCNIP3Q9Y2W7 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
KCNIP3Q9Y2W7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms