Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 DFFBP1-201ENST00000433250 979 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 GNAQP1-201ENST00000444815 1067 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 KRT18P43-201ENST00000469825 1281 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 TERF1P3-201ENST00000505638 1227 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 AC023310.3-201ENST00000557027 670 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 AC100756.1-201ENST00000562736 682 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 RRP7BP-205ENST00000566851 833 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 AC138749.3-201ENST00000567691 622 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 AC015910.1-201ENST00000579400 975 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 AC004233.3-201ENST00000607794 1269 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 AC116165.1-201ENST00000611806 668 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PPARGC1AQ9UBK2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 CICP13-201ENST00000422015 2789 ntBASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 AC105250.1-201ENST00000509378 2057 ntBASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 AL391825.1-201ENST00000457671 1364 ntBASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 SSR4P1-203ENST00000599569 2260 ntBASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 MIR3197-201ENST00000582241 73 ntBASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 AC000095.1-201ENST00000603208 874 ntBASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PPARGC1AQ9UBK2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PPARGC1AQ9UBK2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.14■□□□□ 0.18
PPARGC1AQ9UBK2 AL121723.1-201ENST00000445194 1519 ntBASIC16.14■□□□□ 0.18
PPARGC1AQ9UBK2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 SLC7A15P-201ENST00000424028 1363 ntBASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.14■□□□□ 0.17
PPARGC1AQ9UBK2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms