Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 AC004870.1-201ENST00000315132 882 ntBASIC14.18□□□□□ -0.14
CLN6Q9NWW5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 FAAHP1-202ENST00000446499 1238 ntBASIC14.18□□□□□ -0.14
CLN6Q9NWW5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 REXO1L2P-201ENST00000425429 2069 ntBASIC14.18□□□□□ -0.14
CLN6Q9NWW5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLN6Q9NWW5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 AC073389.1-201ENST00000595595 795 ntBASIC14.17□□□□□ -0.14
CLN6Q9NWW5 AL031008.1-201ENST00000619963 541 ntBASIC14.17□□□□□ -0.14
CLN6Q9NWW5 AC004877.2-201ENST00000623941 599 ntBASIC14.17□□□□□ -0.14
CLN6Q9NWW5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CLN6Q9NWW5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 AL136982.4-201ENST00000437689 1740 ntBASIC14.16□□□□□ -0.14
CLN6Q9NWW5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 KRT19P2-202ENST00000557173 1012 ntBASIC14.16□□□□□ -0.14
CLN6Q9NWW5 RN7SL510P-201ENST00000581311 263 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms