Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.01□□□□□ -0.01
CUEDC1Q9NWM3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 LINC02228-204ENST00000642115 2962 ntBASIC15□□□□□ -0.01
CUEDC1Q9NWM3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AC055876.2-201ENST00000531834 546 ntBASIC15□□□□□ -0.01
CUEDC1Q9NWM3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AC106886.1-201ENST00000568660 600 ntBASIC15□□□□□ -0.01
CUEDC1Q9NWM3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AC140912.1-201ENST00000577171 1054 ntBASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AC000095.1-201ENST00000603208 874 ntBASIC15□□□□□ -0.01
CUEDC1Q9NWM3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15□□□□□ -0.01
CUEDC1Q9NWM3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 DFFBP1-201ENST00000433250 979 ntBASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 AC036164.1-201ENST00000570544 333 ntBASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 CHCHD2P3-201ENST00000603038 451 ntBASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 MIR8072-201ENST00000614241 80 ntBASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 AC104640.1-201ENST00000562617 2109 ntBASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CUEDC1Q9NWM3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CUEDC1Q9NWM3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms