Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 TMBIM7P-203ENST00000641617 1718 ntBASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 MIR661-201ENST00000384842 89 ntBASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AC138761.1-201ENST00000584393 385 ntBASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SDHAF3Q9NRP4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 AC090616.6-203ENST00000579186 1945 ntBASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 AC123567.1-201ENST00000548294 1261 ntBASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 AC140912.1-201ENST00000577171 1054 ntBASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 AL391069.4-201ENST00000609583 481 ntBASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SDHAF3Q9NRP4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms