Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC18.48■□□□□ 0.55
RTN4Q9NQC3 SNX33P1-201ENST00000592116 1762 ntBASIC18.47■□□□□ 0.55
RTN4Q9NQC3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 RET-205ENST00000615310 4337 ntTSL 5 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 PRYP5-201ENST00000451909 266 ntBASIC18.47■□□□□ 0.55
RTN4Q9NQC3 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RTN4Q9NQC3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 AC011700.1-201ENST00000610409 2627 ntBASIC18.46■□□□□ 0.55
RTN4Q9NQC3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 GGT3P-204ENST00000453783 1664 ntBASIC18.46■□□□□ 0.55
RTN4Q9NQC3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RTN4Q9NQC3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 CYP27C1-202ENST00000409327 2092 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 AC104819.1-201ENST00000504587 486 ntBASIC18.45■□□□□ 0.54
RTN4Q9NQC3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RTN4Q9NQC3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms