Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AL133267.1-201ENST00000398220 340 ntBASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AC002472.2-201ENST00000442739 958 ntBASIC13.58□□□□□ -0.24
CDH20Q9HBT6 GNAQP1-201ENST00000444815 1067 ntBASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AL589987.1-201ENST00000453380 819 ntBASIC13.58□□□□□ -0.24
CDH20Q9HBT6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AC055876.2-201ENST00000531834 546 ntBASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 RN7SL204P-201ENST00000582831 262 ntBASIC13.58□□□□□ -0.24
CDH20Q9HBT6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CDH20Q9HBT6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AC087481.3-201ENST00000602886 1894 ntBASIC13.57□□□□□ -0.24
CDH20Q9HBT6 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AC015910.1-201ENST00000579400 975 ntBASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AL132655.2-201ENST00000596276 594 ntBASIC13.57□□□□□ -0.24
CDH20Q9HBT6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 AL121723.1-201ENST00000445194 1519 ntBASIC13.57□□□□□ -0.24
CDH20Q9HBT6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CDH20Q9HBT6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.56□□□□□ -0.24
CDH20Q9HBT6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CDH20Q9HBT6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms