Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 AL391069.4-201ENST00000609583 481 ntBASIC14.79□□□□□ -0.04
BRF2Q9HAW0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 AL158212.4-201ENST00000624062 1286 ntBASIC14.79□□□□□ -0.04
BRF2Q9HAW0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BRF2Q9HAW0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 AC022144.1-201ENST00000602255 1580 ntBASIC14.78□□□□□ -0.04
BRF2Q9HAW0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 AC004890.2-204ENST00000481968 304 ntBASIC14.78□□□□□ -0.04
BRF2Q9HAW0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.78□□□□□ -0.04
BRF2Q9HAW0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 AL390754.1-201ENST00000619088 582 ntBASIC14.78□□□□□ -0.04
BRF2Q9HAW0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BRF2Q9HAW0 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
BRF2Q9HAW0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 AC135586.1-201ENST00000539323 574 ntBASIC14.77□□□□□ -0.05
BRF2Q9HAW0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 SAMD11P1-201ENST00000571429 661 ntBASIC14.77□□□□□ -0.05
BRF2Q9HAW0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms