Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC096631.2-201ENST00000436136 790 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 GAPDHP17-201ENST00000449858 1001 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC098824.1-201ENST00000453565 980 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 PYM1-204ENST00000454792 884 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC073288.2-201ENST00000468232 664 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 HNRNPA3P8-201ENST00000474219 974 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC109486.1-201ENST00000486833 374 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 NACAP1-202ENST00000519039 641 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 PINX1-203ENST00000519088 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 COX6CP5-201ENST00000527162 228 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 OR8I1P-201ENST00000529291 931 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 RBM4B-207ENST00000531969 769 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL157687.1-201ENST00000554853 619 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 DUXAP1-201ENST00000556632 463 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC138907.5-202ENST00000569484 235 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC012146.2-201ENST00000576545 416 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 MIR3171-201ENST00000584270 74 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AP001269.3-201ENST00000588718 329 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 NUTF2P8-201ENST00000604593 363 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL031432.3-201ENST00000607698 485 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC243772.3-202ENST00000609662 1148 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL590096.1-202ENST00000618162 580 ntTSL 3 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL136967.2-201ENST00000623968 743 ntBASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 LINC00969-297ENST00000627767 929 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 TAB2-AS1-202ENST00000637865 794 ntTSL 5 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 MFSD14B-202ENST00000428393 2275 ntTSL 5 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 LRRTM2-202ENST00000518785 1958 ntTSL 2 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
KRTAP3-3Q9BYR6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 H19-201ENST00000411754 1788 ntTSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 KATNAL2-202ENST00000356157 1635 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 RCL1-208ENST00000448872 1459 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 KRT87P-202ENST00000534226 1464 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 DCAF13P1-201ENST00000495256 1330 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 IL13-201ENST00000304506 1283 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 Y_RNA.58-201ENST00000362807 102 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 Y_RNA.154-201ENST00000363624 102 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 RNY3P1-201ENST00000365085 102 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 RNY3-201ENST00000365484 102 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 Y_RNA.490-201ENST00000384413 102 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 NT5C3AP1-201ENST00000394500 1012 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 RPL7P27-201ENST00000403775 720 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 MIR548P-201ENST00000408336 84 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 HNRNPA1P64-201ENST00000411674 922 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 RPL21P108-201ENST00000413857 481 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 AC231533.2-201ENST00000419045 978 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 OR1AA1P-201ENST00000419597 916 ntBASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC9.93□□□□□ -0.82
KRTAP3-3Q9BYR6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms