RNA–Protein interactions for RNA: ENST00000563844.1

CASC16-202, Transcript of cancer susceptibility 16, humanhuman

TSL 3 BASIC

Gene CASC16, Length 610 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC16-202ENST00000563844 AEBP2Q6ZN18 517 aaPredicted RBP22.8■■□□□ 1.24
CASC16-202ENST00000563844 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
CASC16-202ENST00000563844 PHF23Q9BUL5 403 aaPredicted RBP19.63■□□□□ 0.73
CASC16-202ENST00000563844 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
CASC16-202ENST00000563844 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
CASC16-202ENST00000563844 FOXD1Q16676 465 aa17.96■□□□□ 0.47
CASC16-202ENST00000563844 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
CASC16-202ENST00000563844 ADRA2BP18089 450 aa17.25■□□□□ 0.35
CASC16-202ENST00000563844 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
CASC16-202ENST00000563844 MSH5O43196 834 aa16.67■□□□□ 0.26
CASC16-202ENST00000563844 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
CASC16-202ENST00000563844 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
CASC16-202ENST00000563844 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
CASC16-202ENST00000563844 KCNA4P22459 653 aa15.64■□□□□ 0.09
CASC16-202ENST00000563844 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
CASC16-202ENST00000563844 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
CASC16-202ENST00000563844 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
CASC16-202ENST00000563844 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
CASC16-202ENST00000563844 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
CASC16-202ENST00000563844 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
CASC16-202ENST00000563844 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
CASC16-202ENST00000563844 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
CASC16-202ENST00000563844 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
CASC16-202ENST00000563844 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
CASC16-202ENST00000563844 SLC4A2P04920 1241 aa14.5□□□□□ -0.09
CASC16-202ENST00000563844 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
CASC16-202ENST00000563844 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
CASC16-202ENST00000563844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
CASC16-202ENST00000563844 ZBTB22O15209 634 aa14.37□□□□□ -0.11
CASC16-202ENST00000563844 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
CASC16-202ENST00000563844 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
CASC16-202ENST00000563844 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
CASC16-202ENST00000563844 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
CASC16-202ENST00000563844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
CASC16-202ENST00000563844 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
CASC16-202ENST00000563844 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
CASC16-202ENST00000563844 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
CASC16-202ENST00000563844 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
CASC16-202ENST00000563844 APLP2Q06481 763 aa14.06□□□□□ -0.16
CASC16-202ENST00000563844 CACNB1Q02641 598 aaPredicted RBP13.79□□□□□ -0.2
CASC16-202ENST00000563844 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
CASC16-202ENST00000563844 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
CASC16-202ENST00000563844 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
CASC16-202ENST00000563844 CAPN15O75808 1086 aa13.73□□□□□ -0.21
CASC16-202ENST00000563844 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
CASC16-202ENST00000563844 DSG3P32926 999 aa13.54□□□□□ -0.24
CASC16-202ENST00000563844 POLA2Q14181 598 aa13.48□□□□□ -0.25
CASC16-202ENST00000563844 ABCB7O75027 752 aa13.41□□□□□ -0.26
CASC16-202ENST00000563844 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
CASC16-202ENST00000563844 FBLN2P98095 1184 aa13.3□□□□□ -0.28
CASC16-202ENST00000563844 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
CASC16-202ENST00000563844 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
CASC16-202ENST00000563844 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
CASC16-202ENST00000563844 SPDYE2Q495Y8 402 aa13.01□□□□□ -0.33
CASC16-202ENST00000563844 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
CASC16-202ENST00000563844 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
CASC16-202ENST00000563844 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
CASC16-202ENST00000563844 FKBP8Q14318 412 aa12.96□□□□□ -0.33
CASC16-202ENST00000563844 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
CASC16-202ENST00000563844 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
CASC16-202ENST00000563844 PROM2Q8N271 834 aa12.83□□□□□ -0.36
CASC16-202ENST00000563844 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
CASC16-202ENST00000563844 PABPN1Q86U42 306 aaKnown RBP eCLIP12.7□□□□□ -0.38
CASC16-202ENST00000563844 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
CASC16-202ENST00000563844 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
CASC16-202ENST00000563844 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
CASC16-202ENST00000563844 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
CASC16-202ENST00000563844 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
CASC16-202ENST00000563844 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
CASC16-202ENST00000563844 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
CASC16-202ENST00000563844 VASPP50552 380 aaPredicted RBP12.37□□□□□ -0.43
CASC16-202ENST00000563844 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
CASC16-202ENST00000563844 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
CASC16-202ENST00000563844 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
CASC16-202ENST00000563844 MIER1Q8N108 512 aa12.27□□□□□ -0.45
CASC16-202ENST00000563844 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
CASC16-202ENST00000563844 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
CASC16-202ENST00000563844 CREBZFQ9NS37 354 aa12.22□□□□□ -0.45
CASC16-202ENST00000563844 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
CASC16-202ENST00000563844 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
CASC16-202ENST00000563844 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
CASC16-202ENST00000563844 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
CASC16-202ENST00000563844 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
CASC16-202ENST00000563844 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
CASC16-202ENST00000563844 CHADLQ6NUI6 762 aa12.08□□□□□ -0.48
CASC16-202ENST00000563844 SPOCK2Q92563 424 aa12.08□□□□□ -0.48
CASC16-202ENST00000563844 FARP1Q9Y4F1 1045 aaPredicted RBP12.08□□□□□ -0.48
CASC16-202ENST00000563844 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
CASC16-202ENST00000563844 NUBP1P53384 320 aa11.97□□□□□ -0.49
CASC16-202ENST00000563844 GSE1Q14687 1217 aa11.91□□□□□ -0.5
CASC16-202ENST00000563844 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
CASC16-202ENST00000563844 POTEHQ6S545 545 aa11.9□□□□□ -0.5
CASC16-202ENST00000563844 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
CASC16-202ENST00000563844 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
CASC16-202ENST00000563844 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
CASC16-202ENST00000563844 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
CASC16-202ENST00000563844 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
CASC16-202ENST00000563844 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
CASC16-202ENST00000563844 CIZ1Q9ULV3 898 aaPredicted RBP11.81□□□□□ -0.52
CASC16-202ENST00000563844 CD44P16070 742 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms