Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 AP001063.1-201ENST00000568332 529 ntBASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 GNRHR2-203ENST00000581100 1187 ntBASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 FAM45BP-202ENST00000592932 1624 ntBASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 LINC02228-204ENST00000642115 2962 ntBASIC18.69■□□□□ 0.58
RPAP1Q9BWH6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 FAM21FP-201ENST00000426241 1131 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 FTH1P14-201ENST00000482930 551 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 AC106760.1-201ENST00000508690 800 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 FAM8A2P-201ENST00000528813 1142 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 MIR4538-201ENST00000581377 78 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 MIR6869-201ENST00000619434 62 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 PKD1P1-201ENST00000458669 6805 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 AL133338.1-201ENST00000565695 1517 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 AC022137.2-201ENST00000503482 481 ntBASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.68■□□□□ 0.58
RPAP1Q9BWH6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.67■□□□□ 0.58
RPAP1Q9BWH6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms