Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 AC067750.1-201ENST00000608826 6545 ntBASIC17.75■□□□□ 0.43
ARID3AQ99856 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ARID3AQ99856 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
ARID3AQ99856 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ARID3AQ99856 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.75■□□□□ 0.43
ARID3AQ99856 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 MCCD1P2-201ENST00000423228 335 ntBASIC17.75■□□□□ 0.43
ARID3AQ99856 FAM58CP-201ENST00000435741 640 ntBASIC17.75■□□□□ 0.43
ARID3AQ99856 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ARID3AQ99856 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.75■□□□□ 0.43
ARID3AQ99856 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.75■□□□□ 0.43
ARID3AQ99856 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ARID3AQ99856 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.75■□□□□ 0.43
ARID3AQ99856 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ARID3AQ99856 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC17.75■□□□□ 0.43
ARID3AQ99856 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.75■□□□□ 0.43
ARID3AQ99856 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.75■□□□□ 0.43
ARID3AQ99856 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ARID3AQ99856 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ARID3AQ99856 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.75■□□□□ 0.43
ARID3AQ99856 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.75■□□□□ 0.43
ARID3AQ99856 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.74■□□□□ 0.43
ARID3AQ99856 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ARID3AQ99856 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.74■□□□□ 0.43
ARID3AQ99856 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ARID3AQ99856 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.74■□□□□ 0.43
ARID3AQ99856 YBX2P1-201ENST00000394192 760 ntBASIC17.74■□□□□ 0.43
ARID3AQ99856 BX842568.4-201ENST00000421222 227 ntBASIC17.74■□□□□ 0.43
ARID3AQ99856 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.74■□□□□ 0.43
ARID3AQ99856 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.74■□□□□ 0.43
ARID3AQ99856 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.74■□□□□ 0.43
ARID3AQ99856 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.74■□□□□ 0.43
ARID3AQ99856 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ARID3AQ99856 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.74■□□□□ 0.43
ARID3AQ99856 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.74■□□□□ 0.43
ARID3AQ99856 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.74■□□□□ 0.43
ARID3AQ99856 AC139530.3-201ENST00000620344 690 ntBASIC17.74■□□□□ 0.43
ARID3AQ99856 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.74■□□□□ 0.43
ARID3AQ99856 AC092902.6-201ENST00000641783 218 ntBASIC17.74■□□□□ 0.43
ARID3AQ99856 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.74■□□□□ 0.43
ARID3AQ99856 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.74■□□□□ 0.43
ARID3AQ99856 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.74■□□□□ 0.43
ARID3AQ99856 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.74■□□□□ 0.43
ARID3AQ99856 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ARID3AQ99856 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.74■□□□□ 0.43
ARID3AQ99856 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ARID3AQ99856 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC17.74■□□□□ 0.43
ARID3AQ99856 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ARID3AQ99856 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ARID3AQ99856 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ARID3AQ99856 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ARID3AQ99856 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARID3AQ99856 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.73■□□□□ 0.43
ARID3AQ99856 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARID3AQ99856 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.73■□□□□ 0.43
ARID3AQ99856 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ARID3AQ99856 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.73■□□□□ 0.43
ARID3AQ99856 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARID3AQ99856 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARID3AQ99856 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ARID3AQ99856 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.73■□□□□ 0.43
ARID3AQ99856 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ARID3AQ99856 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ARID3AQ99856 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms