Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.83□□□□□ -0.36
GAFA1Q96PS6 AC067930.6-201ENST00000623257 4947 ntBASIC12.83□□□□□ -0.36
GAFA1Q96PS6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AC007787.1-201ENST00000588095 1583 ntBASIC12.82□□□□□ -0.36
GAFA1Q96PS6 REXO1L4P-201ENST00000605109 1937 ntBASIC12.82□□□□□ -0.36
GAFA1Q96PS6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AC027307.3-201ENST00000594262 1100 ntBASIC12.82□□□□□ -0.36
GAFA1Q96PS6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AC025048.6-201ENST00000634326 1161 ntBASIC12.82□□□□□ -0.36
GAFA1Q96PS6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 AC093525.8-201ENST00000624099 1342 ntBASIC12.82□□□□□ -0.36
GAFA1Q96PS6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
GAFA1Q96PS6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 WASH3P-207ENST00000560956 1394 ntBASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TSPY26P-202ENST00000565928 3884 ntBASIC12.81□□□□□ -0.36
GAFA1Q96PS6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 AC012508.2-201ENST00000567613 1472 ntBASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.81□□□□□ -0.36
GAFA1Q96PS6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms