Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
MS4A4EQ96PG1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 MIR600HG-201ENST00000449175 5984 ntBASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 AC104794.3-201ENST00000566840 1248 ntBASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 AC036164.1-201ENST00000570544 333 ntBASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 AC005498.2-205ENST00000593218 784 ntBASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 SRD5A3P1-201ENST00000603021 949 ntBASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.44□□□□□ -0.1
MS4A4EQ96PG1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 AL391069.4-201ENST00000609583 481 ntBASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
MS4A4EQ96PG1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms